Oberseminar Computational Genomics
Module IN2122
Lecturer Julien Gagneur
Room 01.09.034
Time Wednesdays, 9:30 - 11:00
Timetable
| Wed, Apr 1 | Daniela Andrade Salazar | Uncovering thousands of new HLA antigens and phosphopeptides with deep learning-based sequence-mask-search de novo peptide sequencing framework |
| Wed, Apr 8 | Nils Wagner | Predicting PSI in non-clinically accessible tissues from RNA-seq measurements in blood |
| Wed, Apr 15 | Nick Smith | Detection and Interpretation of RNA-borne Genetic Variants |
| Wed, Apr 22 | Andreas Schmidt | Association Testing and Gene Prioritization in Chronic Pancreatitis |
| Wed, May 6 | Muhammed Hasan Çelik | Enhanced Splicing Annotation And RNA-Seq From Clinically Accessible Tissues Improves Outlier Prediction For Non-accessible Tissues |
| Wed, May 13 | Pedro Tomaz da Silva | Sequence-based determinants of mRNA halflife in human cells: A quantitative modeling approach |
| Wed, May 20 | Shalvi Mahajan | Gene Prioritization for Rare Disease Diagnostics: A Parameterized Random Walk Approach |
| Wed, Jun 3 | Dr. Benjamin Schubert | Personalised Vaccines - How Algorithms Shape Modern Vaccinology |
| Wed, Jun 10 | Akshat Sharma | Gene Prioritization for Rare Disease Diagnostics: A Federated Learning approach |
| Wed, Jun 19 | Codruț Diaconu | Detecting Aberrantly Expressed Genes in Single-cell RNA Sequencing Data |
| Wed, Jun 24 | Xueqi Cao | Systematic evaluation of leukemia driver genes – using 5000 leukemia genome and transcriptome data |
| Wed, Jul 1 | Luise Schuller | Prevalence and possible role of aberrant splicing in leukemia |
| Wed, Jul 8 | Vicente Yépez | The added value of RNA sequencing over WES for variant interpretation and diagnosis of patients with rare genetic disorders |
| Wed, Jul 15 | Vangelis Theodorakis | Tissue-specific prediction of mRNA half-life using sequence based models |
| Wed, Jul 22 | Florian Hölzlwimmer | Multi-tissue prediction of aberrant gene regulation |
| Wed, Aug 5 | Felix Brechtmann | Gene prioritization |
| Wed, Aug 12 | Muhammed Hasan Çelik | Improved prediction of MMSplice on aberrant splicing |
| Wed, Sept 2 | Akshat Sharma | Gene Prioritization for Rare Disease Diagnostics: A Federated Learning approach |
| Wed, Sept 16 | Codruț Diaconu | Detecting Aberrantly Expressed Genes in Single-cell RNA Sequencing Data |
| Wed, Sept 16 | Stefan Dvorestskii | Variants in SARS-CoV-2 genome |
| Wed, Sept 23 | Jeffrey Chao | Imaging the life and death of mRNAs in single cells |
| Wed, Sept 30 | Pedro Tomaz da Silva | Sequence-based determinants of mRNA halflife in human cells: A quantitative modeling approach |